非官方中文翻译 本页译自 MNE-Python 官方文档： 查看英文原文 ↗。 文档版权归 MNE Developers 所有（BSD-3-Clause）。

绘制皮层分区

本示例下载 HCP-MMP1.0 分区 [1] 并在 fsaverage 上显示；同时下载 [2] 中定制的 448 标签 aparc 分区。

说明

HCP-MMP 数据集有使用限制的许可条款，其中特别相关的是：

“当公开发表任何受益于 WU-Minn HCP 数据或其衍生数据的结果或算法时，我将声明使用了 WU-Minn HCP 数据及由其衍生的数据。”

# Author: Eric Larson <larson.eric.d@gmail.com>
#         Denis Engemann <denis.engemann@gmail.com>
#
# License: BSD-3-Clause
# Copyright the MNE-Python contributors.

import mne

Brain = mne.viz.get_brain_class()

subjects_dir = mne.datasets.sample.data_path() / "subjects"
mne.datasets.fetch_hcp_mmp_parcellation(subjects_dir=subjects_dir, verbose=True)

mne.datasets.fetch_aparc_sub_parcellation(subjects_dir=subjects_dir, verbose=True)

labels = mne.read_labels_from_annot(
    "fsaverage", "HCPMMP1", "lh", subjects_dir=subjects_dir
)

brain = Brain(
    "fsaverage",
    "lh",
    "inflated",
    subjects_dir=subjects_dir,
    cortex="low_contrast",
    background="white",
    size=(800, 600),
)
brain.add_annotation("HCPMMP1")
aud_label = [label for label in labels if label.name == "L_A1_ROI-lh"][0]
brain.add_label(aud_label, borders=False)

Reading labels from parcellation...
   read 181 labels from /home/circleci/mne_data/MNE-sample-data/subjects/fsaverage/label/lh.HCPMMP1.annot
Reading labels from parcellation...
   read 181 labels from /home/circleci/mne_data/MNE-sample-data/subjects/fsaverage/label/lh.HCPMMP1.annot

也可以绘制合并后的标签集（每个半球 23 个）。

brain = Brain(
    "fsaverage",
    "lh",
    "inflated",
    subjects_dir=subjects_dir,
    cortex="low_contrast",
    background="white",
    size=(800, 600),
)
brain.add_annotation("HCPMMP1_combined")

Reading labels from parcellation...
   read 23 labels from /home/circleci/mne_data/MNE-sample-data/subjects/fsaverage/label/lh.HCPMMP1_combined.annot

还可以添加另一种自定义分区

brain = Brain(
    "fsaverage",
    "lh",
    "inflated",
    subjects_dir=subjects_dir,
    cortex="low_contrast",
    background="white",
    size=(800, 600),
)
brain.add_annotation("aparc_sub")

Reading labels from parcellation...
   read 226 labels from /home/circleci/mne_data/MNE-sample-data/subjects/fsaverage/label/lh.aparc_sub.annot

参考文献

[1]

Matthew F. Glasser, Timothy S. Coalson, Emma C. Robinson, Carl D. Hacker, John Harwell, Essa Yacoub, Kamil Ugurbil, Jesper Andersson, Christian F. Beckmann, Mark Jenkinson, Stephen M. Smith, and David C. Van Essen. A multi-modal parcellation of human cerebral cortex. Nature, 536(7615):171–178, 2016. doi:10.1038/nature18933.

[2]

Sheraz Khan, Javeria A. Hashmi, Fahimeh Mamashli, Konstantinos Michmizos, Manfred G. Kitzbichler, Hari Bharadwaj, Yousra Bekhti, Santosh Ganesan, Keri-Lee A. Garel, Susan Whitfield-Gabrieli, Randy L. Gollub, Jian Kong, Lucia M. Vaina, Kunjan D. Rana, Steven M. Stufflebeam, Matti S. Hämäläinen, and Tal Kenet. Maturation trajectories of cortical resting-state networks depend on the mediating frequency band. NeuroImage, 174:57–68, 2018. doi:10.1016/j.neuroimage.2018.02.018.